Pericyclic reaction

In organic chemistry, a pericyclic reaction is a type of chemical reaction between organic compounds. In the case of pericyclic reactions, the transition state of the molecule is a ring (has a cyclic geometry), and the reaction goes forward in a concerted way. Pericyclic reactions are usually rearrangement reactions. The most important groups of pericyclic reactions are:

In general, pericyclic reactions are equilibrium processes. However, it is possible to push the reaction in one direction if the product is at a significantly lower energy level. This is applying Le Chatelier's principle to a reaction involving a single molecule.

Many pericyclic reactions have similar stepwise radical processes connected with them. Chemists disagree whether some reactions are pericyclic reactions. For example, it is not definitively known whether the [2+2] cycloaddition mechanism is concerted (or may depend on the reactive system). Many pericyclic reactions have similar reactions that are metal-catalyzed. But these metal-catalyzed reactions are also not really pericyclic. The metal catalysts stabilize the reaction intermediates. So the reaction is not concerted, but rather metal-stabilized.

A large photoinduced hydrogen sigmatropic shift was utilized in a corrin synthesis performed by Albert Eschenmoser containing a 16π system.^[1]

Due to the principle of microscopic reversibility, there is a parallel set of "retro" pericyclic reactions, which perform the reverse reaction.

Pericyclic reactions in biochemistry

Pericyclic reactions also happen in several biological processes:

Claisen rearrangement of chorismate to prephenate in almost all prototrophic organisms.
[1,5]-sigmatropic shift when precorrin-8x is being changed into hydrogenobyrinic acid
non-enzymatic, photochemical electrocyclic ring opening and a (1,7) sigmatropic hydride shift in vitamin D synthesis.
a conversion of Isochorismate into salicylate and Pyruvate in a catalyzed, true pericyclic reaction.^[2]^[3]

Pericyclic Reaction Media

Two types of situations for pericyclic transition states and their relationship to arrow pushing

Related pages

Woodward–Hoffmann rules

References

↑ A New Type of Corrin Synthesis. Yasuji Yamada, D. Miljkovic, P. Wehrli, B. Golding, P. Loliger, R. Keese, K. Miiller, and A. Eschenmoser. Angew. Chem. Int. Edit. 1969, 8(5),343-348. ^{[dead link]}
↑ Isochorismate Pyruvate Lyase: A Pericyclic Reaction Mechanism? Michael S. DeClue, Kim K. Baldridge, Dominik E. Künzler, Peter Kast, and Donald Hilvert J. Am. Chem. Soc.; 2005; 127(43) pp 15002 - 15003; (Communication) DOI: 10.1021/ja055871t Abstract^{[dead link]}
↑ In this experiment isochorismate is deuterated in one specific position and subjected to the lyase. Two important observations rule out other reaction mechanisms, ionic or base promoted. From the kinetic isotope effect (value 2.34) it can be inferred that carbon to hydrogen bond breaking occurs in the transition state of the rate determining step. NMR spectroscopy shows that the deuterium atom alone is transferred to the pyruvate molecule.

Organic Chemistry

[1] A New Type of Corrin Synthesis. Yasuji Yamada, D. Miljkovic, P. Wehrli, B. Golding, P. Loliger, R. Keese, K. Miiller, and A. Eschenmoser. Angew. Chem. Int. Edit. 1969, 8(5),343-348. ^{[dead link]}

[2] Isochorismate Pyruvate Lyase: A Pericyclic Reaction Mechanism? Michael S. DeClue, Kim K. Baldridge, Dominik E. Künzler, Peter Kast, and Donald Hilvert J. Am. Chem. Soc.; 2005; 127(43) pp 15002 - 15003; (Communication) DOI: 10.1021/ja055871t Abstract^{[dead link]}

[3] In this experiment isochorismate is deuterated in one specific position and subjected to the lyase. Two important observations rule out other reaction mechanisms, ionic or base promoted. From the kinetic isotope effect (value 2.34) it can be inferred that carbon to hydrogen bond breaking occurs in the transition state of the rate determining step. NMR spectroscopy shows that the deuterium atom alone is transferred to the pyruvate molecule.

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